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GLB1L2 galactosidase beta 1 like 2 [ Microcaecilia unicolor ]

Gene ID: 115481979, updated on 17-Mar-2024

Summary

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Gene symbol
GLB1L2
Gene description
galactosidase beta 1 like 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See GLB1L2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
21
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 12 NC_044042.1 (34240903..34360478)

Chromosome 12 - NC_044042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115482015 Neighboring gene VPS26, retromer complex component B Neighboring gene beta-1,3-glucuronyltransferase 1 Neighboring gene uncharacterized LOC115482017

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044042.1 Chromosome 12 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactosidase-1-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044042.1 Reference aMicUni1.1 Primary Assembly

    Range
    34240903..34360478
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030221490.1 → XP_030077350.1  beta-galactosidase-1-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZVQ7
    Conserved Domains (1) summary
    pfam01301
    Location:49 → 359
    Glyco_hydro_35; Glycosyl hydrolases family 35

  2. XM_030221494.1 → XP_030077354.1  beta-galactosidase-1-like protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A6P7ZUZ8
    Conserved Domains (1) summary
    pfam01301
    Location:49 → 359
    Glyco_hydro_35; Glycosyl hydrolases family 35

  3. XM_030221492.1 → XP_030077352.1  beta-galactosidase-1-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P7ZDC3
    Conserved Domains (1) summary
    pfam01301
    Location:15 → 325
    Glyco_hydro_35; Glycosyl hydrolases family 35

  4. XM_030221491.1 → XP_030077351.1  beta-galactosidase-1-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P7ZSY6
    Conserved Domains (1) summary
    pfam01301
    Location:26 → 336
    Glyco_hydro_35; Glycosyl hydrolases family 35

  5. XM_030221493.1 → XP_030077353.1  beta-galactosidase-1-like protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P7ZDC3
    Conserved Domains (1) summary
    pfam01301
    Location:15 → 325
    Glyco_hydro_35; Glycosyl hydrolases family 35
Nucleotide Protein
Heading Accession and Version

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