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ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [ Microcaecilia unicolor ]

Gene ID: 115481744, updated on 17-Mar-2024

Summary

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Gene symbol
ST3GAL4
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See ST3GAL4 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
17
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 12 NC_044042.1 (61744845..62086678, complement)

Chromosome 12 - NC_044042.1Genomic Context describing neighboring genes Neighboring gene ETS proto-oncogene 1, transcription factor Neighboring gene kirre like nephrin family adhesion molecule 3 Neighboring gene FAD dependent oxidoreductase domain containing 1 Neighboring gene decapping enzyme, scavenger

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044042.1 Chromosome 12 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044042.1 Reference aMicUni1.1 Primary Assembly

    Range
    61744845..62086678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030221113.1 → XP_030076973.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P7ZGE5
    Conserved Domains (1) summary
    pfam00777
    Location:67 → 332
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_030221108.1 → XP_030076968.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZCA3
    Conserved Domains (1) summary
    pfam00777
    Location:75 → 340
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_030221110.1 → XP_030076970.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZCA3
    Conserved Domains (1) summary
    pfam00777
    Location:75 → 340
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_030221109.1 → XP_030076969.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZCA3
    Conserved Domains (1) summary
    pfam00777
    Location:75 → 340
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_030221114.1 → XP_030076974.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P7ZGE5
    Conserved Domains (1) summary
    pfam00777
    Location:67 → 332
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_030221115.1 → XP_030076975.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P7ZGE5
    Conserved Domains (1) summary
    pfam00777
    Location:67 → 332
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  7. XM_030221112.1 → XP_030076972.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZCA3
    Conserved Domains (1) summary
    pfam00777
    Location:75 → 340
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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