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GPAA1 glycosylphosphatidylinositol anchor attachment 1 [ Microcaecilia unicolor ]

Gene ID: 115481067, updated on 17-Mar-2024

Summary

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Gene symbol
GPAA1
Gene description
glycosylphosphatidylinositol anchor attachment 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See GPAA1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 1 NC_044031.1 (618305516..618398855, complement)

Chromosome 1 - NC_044031.1Genomic Context describing neighboring genes Neighboring gene SHANK associated RH domain interactor Neighboring gene cytochrome c1, heme protein, mitochondrial Neighboring gene exosome component 4 Neighboring gene 5-oxoprolinase, ATP-hydrolysing

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044031.1 Chromosome 1 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosylphosphatidylinositol anchor attachment 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044031.1 Reference aMicUni1.1 Primary Assembly

    Range
    618305516..618398855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030220069.1 → XP_030075929.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZNF0
    Conserved Domains (1) summary
    pfam04114
    Location:126 → 611
    Gaa1; Gaa1-like, GPI transamidase component

  2. XM_030220079.1 → XP_030075939.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZNF0
    Conserved Domains (1) summary
    pfam04114
    Location:126 → 611
    Gaa1; Gaa1-like, GPI transamidase component

  3. XM_030220087.1 → XP_030075947.1  glycosylphosphatidylinositol anchor attachment 1 protein isoform X2

    UniProtKB/TrEMBL
    A0A6P7Z9E6
    Conserved Domains (1) summary
    pfam04114
    Location:4 → 489
    Gaa1; Gaa1-like, GPI transamidase component
Nucleotide Protein
Heading Accession and Version

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