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ACER1 alkaline ceramidase 1 [ Microcaecilia unicolor ]

Gene ID: 115480832, updated on 17-Mar-2024

Summary

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Gene symbol
ACER1
Gene description
alkaline ceramidase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See ACER1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 11 NC_044041.1 (100219701..100336379)

Chromosome 11 - NC_044041.1Genomic Context describing neighboring genes Neighboring gene acidic leucine-rich nuclear phosphoprotein 32 family member B-like Neighboring gene uncharacterized LOC115480554 Neighboring gene 60S ribosomal protein L17 pseudogene Neighboring gene MLLT1 super elongation complex subunit Neighboring gene uncharacterized LOC115479847 Neighboring gene acyl-CoA synthetase bubblegum family member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044041.1 Chromosome 11 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044041.1 Reference aMicUni1.1 Primary Assembly

    Range
    100219701..100336379
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030219763.1 → XP_030075623.1  alkaline ceramidase 1

    UniProtKB/TrEMBL
    A0A6P7ZD15
    Conserved Domains (1) summary
    pfam05875
    Location:15 → 266
    Ceramidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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