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SQLE squalene epoxidase [ Microcaecilia unicolor ]

Gene ID: 115480384, updated on 17-Mar-2024

Summary

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Gene symbol
SQLE
Gene description
squalene epoxidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See SQLE in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 1 NC_044031.1 (582755891..582828016)

Chromosome 1 - NC_044031.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115480376 Neighboring gene MTSS I-BAR domain containing 1 Neighboring gene uncharacterized LOC115480381 Neighboring gene sn1-specific diacylglycerol lipase beta pseudogene Neighboring gene WASH complex subunit 5 Neighboring gene NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044031.1 Chromosome 1 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables squalene monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
squalene monooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044031.1 Reference aMicUni1.1 Primary Assembly

    Range
    582755891..582828016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030219042.1 → XP_030074902.1  squalene monooxygenase

    UniProtKB/TrEMBL
    A0A6P7Z6D1
    Conserved Domains (2) summary
    PRK07045
    Location:117 → 419
    PRK07045; putative monooxygenase; Reviewed
    cl21454
    Location:269 → 539
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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