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PPT1 palmitoyl-protein thioesterase 1 [ Microcaecilia unicolor ]

Gene ID: 115479772, updated on 17-Mar-2024

Summary

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Gene symbol
PPT1
Gene description
palmitoyl-protein thioesterase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See PPT1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 11 NC_044041.1 (208032402..208095864, complement)

Chromosome 11 - NC_044041.1Genomic Context describing neighboring genes Neighboring gene MFSD2 lysolipid transporter A, lysophospholipid Neighboring gene cyclase associated actin cytoskeleton regulatory protein 1 Neighboring gene elongation factor 1-alpha, oocyte form Neighboring gene elongin A Neighboring gene PITH domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044041.1 Chromosome 11 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables palmitoyl-(protein) hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein depalmitoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in receptor-mediated endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
palmitoyl-protein thioesterase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044041.1 Reference aMicUni1.1 Primary Assembly

    Range
    208032402..208095864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030217961.1 → XP_030073821.1  palmitoyl-protein thioesterase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P7ZB95
    Conserved Domains (1) summary
    pfam02089
    Location:24 → 261
    Palm_thioest; Palmitoyl protein thioesterase

  2. XM_030217960.1 → XP_030073820.1  palmitoyl-protein thioesterase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7ZEL0
    Conserved Domains (1) summary
    pfam02089
    Location:25 → 274
    Palm_thioest; Palmitoyl protein thioesterase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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