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SGPP2 sphingosine-1-phosphate phosphatase 2 [ Microcaecilia unicolor ]

Gene ID: 115479171, updated on 17-Mar-2024

Summary

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Gene symbol
SGPP2
Gene description
sphingosine-1-phosphate phosphatase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See SGPP2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 10 NC_044040.1 (165479827..165561280)

Chromosome 10 - NC_044040.1Genomic Context describing neighboring genes Neighboring gene paired box 3 Neighboring gene uncharacterized LOC115478928 Neighboring gene phenylalanyl-tRNA synthetase subunit beta Neighboring gene monoacylglycerol O-acyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044040.1 Chromosome 10 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingosine-1-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine-1-phosphate phosphatase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044040.1 Reference aMicUni1.1 Primary Assembly

    Range
    165479827..165561280
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030216960.1 → XP_030072820.1  sphingosine-1-phosphate phosphatase 2

    UniProtKB/TrEMBL
    A0A6P7ZBQ8
    Conserved Domains (1) summary
    cd03388
    Location:79 → 228
    PAP2_SPPase1; PAP2_like proteins, sphingosine-1-phosphatase subfamily. Sphingosine-1-phosphatase is an intracellular enzyme located in the endoplasmic reticulum, which regulates the level of sphingosine-1-phosphate (S1P), a bioactive lipid. S1P acts as a second ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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