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CPM carboxypeptidase M [ Microcaecilia unicolor ]

Gene ID: 115478175, updated on 17-Mar-2024

Summary

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Gene symbol
CPM
Gene description
carboxypeptidase M
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See CPM in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 9 NC_044039.1 (8077439..8105024, complement)

Chromosome 9 - NC_044039.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 107 Neighboring gene MDM2 proto-oncogene Neighboring gene cleavage and polyadenylation specific factor 6 Neighboring gene lysozyme

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044039.1 Chromosome 9 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase M

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044039.1 Reference aMicUni1.1 Primary Assembly

    Range
    8077439..8105024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030215445.1 → XP_030071305.1  carboxypeptidase M isoform X1

    UniProtKB/TrEMBL
    A0A6P7Z6F8
    Conserved Domains (2) summary
    cd11308
    Location:310 → 388
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cl11393
    Location:22 → 306
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

  2. XM_030215447.1 → XP_030071307.1  carboxypeptidase M isoform X3

    UniProtKB/TrEMBL
    A0A6P7YVZ5
    Conserved Domains (2) summary
    cd11308
    Location:251 → 329
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cl11393
    Location:22 → 247
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

  3. XM_030215444.1 → XP_030071304.1  carboxypeptidase M isoform X1

    UniProtKB/TrEMBL
    A0A6P7Z6F8
    Conserved Domains (2) summary
    cd11308
    Location:310 → 388
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cl11393
    Location:22 → 306
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

  4. XM_030215446.1 → XP_030071306.1  carboxypeptidase M isoform X2

    UniProtKB/TrEMBL
    A0A6P7Z3P4
    Conserved Domains (2) summary
    cd11308
    Location:262 → 340
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cl11393
    Location:7 → 258
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

  5. XM_030215448.1 → XP_030071308.1  carboxypeptidase M isoform X4

    UniProtKB/TrEMBL
    A0A6P7Z209
    Conserved Domains (2) summary
    cd11308
    Location:229 → 307
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cl11393
    Location:1 → 225
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins

  6. XM_030215449.1 → XP_030071309.1  carboxypeptidase M isoform X4

    UniProtKB/TrEMBL
    A0A6P7Z209
    Conserved Domains (2) summary
    cd11308
    Location:229 → 307
    Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    cl11393
    Location:1 → 225
    Peptidase_M14_like; M14 family of metallocarboxypeptidases and related proteins
Nucleotide Protein
Heading Accession and Version

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