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CHGA chromogranin A [ Microcaecilia unicolor ]

Gene ID: 115477992, updated on 17-Mar-2024

Summary

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Gene symbol
CHGA
Gene description
chromogranin A
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See CHGA in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 9 NC_044039.1 (206304387..206356379, complement)

Chromosome 9 - NC_044039.1Genomic Context describing neighboring genes Neighboring gene lysosomal enzyme trafficking factor Neighboring gene inositol-tetrakisphosphate 1-kinase Neighboring gene golgin A5 Neighboring gene legumain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044039.1 Chromosome 9 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of catecholamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of insulin secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromaffin granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromogranin-A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044039.1 Reference aMicUni1.1 Primary Assembly

    Range
    206304387..206356379 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030215170.1 → XP_030071030.1  chromogranin-A isoform X2

    UniProtKB/TrEMBL
    A0A6P7Z6H9
    Conserved Domains (1) summary
    pfam01271
    Location:26 → 483
    Granin; Granin (chromogranin or secretogranin)

  2. XM_030215169.1 → XP_030071029.1  chromogranin-A isoform X1

    UniProtKB/TrEMBL
    A0A6P7Z5K8
    Conserved Domains (1) summary
    pfam01271
    Location:26 → 484
    Granin; Granin (chromogranin or secretogranin)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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