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SPTSSA serine palmitoyltransferase small subunit A [ Microcaecilia unicolor ]

Gene ID: 115477964, updated on 19-Jun-2024

Summary

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Gene symbol
SPTSSA
Gene description
serine palmitoyltransferase small subunit A
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See SPTSSA in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 9 NC_044039.1 (111520054..111544358)

Chromosome 9 - NC_044039.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 6 Neighboring gene E2F associated phosphoprotein Neighboring gene egl-9 family hypoxia inducible factor 3 Neighboring gene neuronal PAS domain protein 3 Neighboring gene uncharacterized LOC115477668

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044039.1 Chromosome 9 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase small subunit A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044039.1 Reference aMicUni1.1 Primary Assembly

    Range
    111520054..111544358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030215133.1 → XP_030070993.1  serine palmitoyltransferase small subunit A

    UniProtKB/TrEMBL
    A0A6P7Z172
    Conserved Domains (1) summary
    pfam11779
    Location:21 → 73
    SPT_ssu-like; Small subunit of serine palmitoyltransferase-like
Nucleotide Protein
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Gene LinkOut

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