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CHST11 carbohydrate sulfotransferase 11 [ Microcaecilia unicolor ]

Gene ID: 115477926, updated on 17-Mar-2024

Summary

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Gene symbol
CHST11
Gene description
carbohydrate sulfotransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See CHST11 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 9 NC_044039.1 (27814088..28048300, complement)

Chromosome 9 - NC_044039.1Genomic Context describing neighboring genes Neighboring gene aldehyde dehydrogenase 1 family member L2 Neighboring gene NOP protein chaperone 1 Neighboring gene solute carrier family 41 member 2 Neighboring gene thioredoxin reductase 1 Neighboring gene nuclear transcription factor Y subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044039.1 Chromosome 9 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044039.1 Reference aMicUni1.1 Primary Assembly

    Range
    27814088..28048300 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030215067.1 → XP_030070927.1  carbohydrate sulfotransferase 11 isoform X2

    UniProtKB/TrEMBL
    A0A6P7YUR8
    Conserved Domains (1) summary
    pfam03567
    Location:108 → 338
    Sulfotransfer_2; Sulfotransferase family

  2. XM_030215066.1 → XP_030070926.1  carbohydrate sulfotransferase 11 isoform X1

    UniProtKB/TrEMBL
    A0A6P7Z2H2
    Conserved Domains (1) summary
    pfam03567
    Location:113 → 343
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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