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ACSS2 acyl-CoA synthetase short chain family member 2 [ Microcaecilia unicolor ]

Gene ID: 115476215, updated on 17-Mar-2024

Summary

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Gene symbol
ACSS2
Gene description
acyl-CoA synthetase short chain family member 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See ACSS2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
18
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 8 NC_044038.1 (241088716..241196434)

Chromosome 8 - NC_044038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115475996 Neighboring gene glutathione synthetase Neighboring gene microtubule crosslinking factor 2 Neighboring gene SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044038.1 Chromosome 8 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables acetate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process from acetate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: acetyl-coenzyme A synthetase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044038.1 Reference aMicUni1.1 Primary Assembly

    Range
    241088716..241196434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030212463.1 → XP_030068323.1  LOW QUALITY PROTEIN: acetyl-coenzyme A synthetase, cytoplasmic

    UniProtKB/TrEMBL
    A0A6P7YTP3
    Conserved Domains (1) summary
    cd05966
    Location:29 → 669
    ACS; Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)
Nucleotide Protein
Heading Accession and Version

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