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LOC115476097 heparan sulfate glucosamine 3-O-sulfotransferase 4 [ Microcaecilia unicolor ]

Gene ID: 115476097, updated on 23-Oct-2023

Summary

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Gene symbol
LOC115476097
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
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Genomic context

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See LOC115476097 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 8 NC_044038.1 (409461..532786, complement)

Chromosome 8 - NC_044038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115476098 Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044038.1 Chromosome 8 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044038.1 Reference aMicUni1.1 Primary Assembly

    Range
    409461..532786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030212251.1 → XP_030068111.1  heparan sulfate glucosamine 3-O-sulfotransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A6P7YTY0
    Conserved Domains (1) summary
    pfam00685
    Location:7 → 206
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_030212252.1 → XP_030068112.1  heparan sulfate glucosamine 3-O-sulfotransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P7YKZ8
    Conserved Domains (1) summary
    pfam00685
    Location:1 → 187
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
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