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PMM2 phosphomannomutase 2 [ Microcaecilia unicolor ]

Gene ID: 115476046, updated on 17-Mar-2024

Summary

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Gene symbol
PMM2
Gene description
phosphomannomutase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See PMM2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 8 NC_044038.1 (41584788..41596866, complement)

Chromosome 8 - NC_044038.1Genomic Context describing neighboring genes Neighboring gene lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog Neighboring gene LITAF domain-containing protein-like Neighboring gene transmembrane protein 186 Neighboring gene 4-aminobutyrate aminotransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044038.1 Chromosome 8 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphomannomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphomannomutase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044038.1 Reference aMicUni1.1 Primary Assembly

    Range
    41584788..41596866 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030212167.1 → XP_030068027.1  phosphomannomutase 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P7YKP8
    Conserved Domains (1) summary
    cd02585
    Location:11 → 247
    HAD_PMM; phosphomannomutase, similar to human PMM1 and PMM2, Saccharomyces Sec53p, and Arabidopsis thaliana PMM

  2. XM_030212168.1 → XP_030068028.1  phosphomannomutase 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P7YST1
    Conserved Domains (1) summary
    pfam03332
    Location:1 → 219
    PMM; Eukaryotic phosphomannomutase
Nucleotide Protein
Heading Accession and Version

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