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ACSL4 acyl-CoA synthetase long chain family member 4 [ Microcaecilia unicolor ]

Gene ID: 115475171, updated on 17-Mar-2024

Summary

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Gene symbol
ACSL4
Gene description
acyl-CoA synthetase long chain family member 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See ACSL4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 7 NC_044037.1 (19382386..19511436)

Chromosome 7 - NC_044037.1Genomic Context describing neighboring genes Neighboring gene AMMECR nuclear protein 1 Neighboring gene transmembrane protein 164 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 5 Neighboring gene nuclear transport factor 2 like export factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044037.1 Chromosome 7 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044037.1 Reference aMicUni1.1 Primary Assembly

    Range
    19382386..19511436
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030210927.1 → XP_030066787.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    UniProtKB/TrEMBL
    A0A6P7YH86
    Conserved Domains (1) summary
    PLN02387
    Location:27 → 708
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  2. XM_030210930.1 → XP_030066790.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P7YPZ5
    Conserved Domains (2) summary
    PRK07868
    Location:7 → 247
    PRK07868; acyl-CoA synthetase; Validated
    cd17639
    Location:80 → 655
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  3. XM_030210929.1 → XP_030066789.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P7YPZ5
    Conserved Domains (2) summary
    PRK07868
    Location:7 → 247
    PRK07868; acyl-CoA synthetase; Validated
    cd17639
    Location:80 → 655
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins

  4. XM_030210931.1 → XP_030066791.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6P7YPZ5
    Conserved Domains (2) summary
    PRK07868
    Location:7 → 247
    PRK07868; acyl-CoA synthetase; Validated
    cd17639
    Location:80 → 655
    LC_FACS_euk1; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS), including fungal proteins
Nucleotide Protein
Heading Accession and Version

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