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ACO2 aconitase 2 [ Microcaecilia unicolor ]

Gene ID: 115474720, updated on 17-Mar-2024

Summary

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Gene symbol
ACO2
Gene description
aconitase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See ACO2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
19
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 1 NC_044031.1 (382712098..382887808, complement)

Chromosome 1 - NC_044031.1Genomic Context describing neighboring genes Neighboring gene CDC42 effector protein 1 Neighboring gene galectin 2 Neighboring gene PHD finger protein 5A Neighboring gene protein Tob2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044031.1 Chromosome 1 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aconitate hydratase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044031.1 Reference aMicUni1.1 Primary Assembly

    Range
    382712098..382887808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030210349.1 → XP_030066209.1  aconitate hydratase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P7YSL7
    Conserved Domains (1) summary
    TIGR01340
    Location:47 → 777
    aconitase_mito; aconitate hydratase, mitochondrial

  2. XM_030210356.1 → XP_030066216.1  aconitate hydratase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P7YN84
    Conserved Domains (1) summary
    TIGR01340
    Location:36 → 766
    aconitase_mito; aconitate hydratase, mitochondrial
Nucleotide Protein
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Gene LinkOut

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