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COG1 component of oligomeric golgi complex 1 [ Microcaecilia unicolor ]

Gene ID: 115473507, updated on 17-Mar-2024

Summary

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Gene symbol
COG1
Gene description
component of oligomeric golgi complex 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See COG1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 6 NC_044036.1 (337227431..337270582)

Chromosome 6 - NC_044036.1Genomic Context describing neighboring genes Neighboring gene somatostatin receptor type 2-like Neighboring gene somatostatin receptor type 2-like Neighboring gene VCP nuclear cofactor family member 1 Neighboring gene mitochondrial nucleoid associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044036.1 Chromosome 6 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044036.1 Reference aMicUni1.1 Primary Assembly

    Range
    337227431..337270582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030208531.1 → XP_030064391.1  conserved oligomeric Golgi complex subunit 1 isoform X3

    UniProtKB/TrEMBL
    A0A6P7YHG3
    Conserved Domains (1) summary
    pfam08700
    Location:23 → 89
    Vps51; Vps51/Vps67

  2. XM_030208529.1 → XP_030064389.1  conserved oligomeric Golgi complex subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A6P7YMZ7
    Conserved Domains (1) summary
    pfam08700
    Location:23 → 89
    Vps51; Vps51/Vps67

  3. XM_030208528.1 → XP_030064388.1  conserved oligomeric Golgi complex subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P7YH84
    Conserved Domains (1) summary
    pfam08700
    Location:23 → 89
    Vps51; Vps51/Vps67
Nucleotide Protein
Heading Accession and Version

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