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LOC115471172 mannose-binding protein A-like [ Microcaecilia unicolor ]

Gene ID: 115471172, updated on 23-Oct-2023

Summary

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Gene symbol
LOC115471172
Gene description
mannose-binding protein A-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
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Genomic context

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See LOC115471172 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 5 NC_044035.1 (125534445..125558152)

Chromosome 5 - NC_044035.1Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 2 Neighboring gene RasGEF domain family member 1A Neighboring gene mannose-binding protein-like Neighboring gene pulmonary surfactant-associated protein A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044035.1 Chromosome 5 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-binding protein A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044035.1 Reference aMicUni1.1 Primary Assembly

    Range
    125534445..125558152
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030204875.1 → XP_030060735.1  mannose-binding protein A-like

    UniProtKB/TrEMBL
    A0A6P7YCG6
    Conserved Domains (3) summary
    pfam01391
    Location:41 → 95
    Collagen; Collagen triple helix repeat (20 copies)
    pfam09006
    Location:109 → 153
    Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerisation
    cl02432
    Location:147 → 259
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
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