U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ATRNL1 attractin like 1 [ Microcaecilia unicolor ]

Gene ID: 115469903, updated on 17-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ATRNL1
Gene description
attractin like 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
29
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 5 NC_044035.1 (12494094..14084995, complement)

Chromosome 5 - NC_044035.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 172 Neighboring gene GDNF family receptor alpha 1 Neighboring gene TruB pseudouridine synthase family member 1 Neighboring gene FHF complex subunit HOOK interacting protein 2A

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_044035.1 Chromosome 5 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: attractin-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044035.1 Reference aMicUni1.1 Primary Assembly

    Range
    12494094..14084995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030202658.1 → XP_030058518.1  LOW QUALITY PROTEIN: attractin-like protein 1

    UniProtKB/TrEMBL
    A0A6P7Y113
    Conserved Domains (9) summary
    cd03597
    Location:737 → 863
    CLECT_attractin_like; C-type lectin-like domain (CTLD) of the type found in human and mouse attractin (AtrN) and attractin-like protein (ALP)
    PLN02153
    Location:489 → 589
    PLN02153; epithiospecifier protein
    PHA03098
    Location:280 → 387
    PHA03098; kelch-like protein; Provisional
    cd00041
    Location:82 → 196
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00055
    Location:1003 → 1047
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    sd00038
    Location:510 → 565
    Kelch; KELCH repeat [structural motif]
    pfam01414
    Location:219 → 269
    DSL; Delta serrate ligand
    pfam01437
    Location:878 → 928
    PSI; Plexin repeat
    pfam13418
    Location:458 → 501
    Kelch_4; Galactose oxidase, central domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.