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PCCA propionyl-CoA carboxylase subunit alpha [ Microcaecilia unicolor ]

Gene ID: 115469063, updated on 17-Mar-2024

Summary

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Gene symbol
PCCA
Gene description
propionyl-CoA carboxylase subunit alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See PCCA in Genome Data Viewer
Location:
chromosome: 4
Exon count:
24
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 4 NC_044034.1 (236587482..237673106, complement)

Chromosome 4 - NC_044034.1Genomic Context describing neighboring genes Neighboring gene protein O-mannosyl-transferase TMTC4-like Neighboring gene protein O-mannosyl-transferase TMTC4-like Neighboring gene Zic family member 2 Neighboring gene Zic family member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044034.1 Chromosome 4 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables propionyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: propionyl-CoA carboxylase alpha chain, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044034.1 Reference aMicUni1.1 Primary Assembly

    Range
    236587482..237673106 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030201346.1 → XP_030057206.1  LOW QUALITY PROTEIN: propionyl-CoA carboxylase alpha chain, mitochondrial

    UniProtKB/TrEMBL
    A0A6P7XW75
    Conserved Domains (1) summary
    COG4770
    Location:49 → 714
    PccA; Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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