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B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 [ Microcaecilia unicolor ]

Gene ID: 115466710, updated on 17-Mar-2024

Summary

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Gene symbol
B3GALNT2
Gene description
beta-1,3-N-acetylgalactosaminyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See B3GALNT2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 3 NC_044033.1 (285421098..285783287)

Chromosome 3 - NC_044033.1Genomic Context describing neighboring genes Neighboring gene 28S ribosomal RNA Neighboring gene 5.8S ribosomal RNA Neighboring gene tubulin folding cofactor E Neighboring gene uncharacterized LOC115466711 Neighboring gene uncharacterized LOC115466712

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044033.1 Chromosome 3 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044033.1 Reference aMicUni1.1 Primary Assembly

    Range
    285421098..285783287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030198137.1 → XP_030053997.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P7XEM0
    Conserved Domains (1) summary
    cl21608
    Location:307 → 458
    Galactosyl_T; Galactosyltransferase

  2. XM_030198139.1 → XP_030053999.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X3

    UniProtKB/TrEMBL
    A0A6P7XU63
    Conserved Domains (1) summary
    cl21608
    Location:270 → 421
    Galactosyl_T; Galactosyltransferase

  3. XM_030198138.1 → XP_030053998.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P7XN65
    Conserved Domains (1) summary
    cl21608
    Location:275 → 426
    Galactosyl_T; Galactosyltransferase

  4. XM_030198140.1 → XP_030054000.1  UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A6P7XTH7
    Conserved Domains (2) summary
    PLN03133
    Location:52 → 97
    PLN03133; beta-1,3-galactosyltransferase; Provisional
    cl21608
    Location:307 → 380
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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