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SLC3A1 solute carrier family 3 member 1 [ Microcaecilia unicolor ]

Gene ID: 115465370, updated on 17-Mar-2024

Summary

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Gene symbol
SLC3A1
Gene description
solute carrier family 3 member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See SLC3A1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 3 NC_044033.1 (28528043..28601378)

Chromosome 3 - NC_044033.1Genomic Context describing neighboring genes Neighboring gene leucine rich pentatricopeptide repeat containing Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene prolyl endopeptidase like Neighboring gene calmodulin-lysine N-methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044033.1 Chromosome 3 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: neutral and basic amino acid transport protein rBAT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044033.1 Reference aMicUni1.1 Primary Assembly

    Range
    28528043..28601378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030195803.1 → XP_030051663.1  LOW QUALITY PROTEIN: neutral and basic amino acid transport protein rBAT

    UniProtKB/TrEMBL
    A0A6P7XGR4
    Conserved Domains (1) summary
    cd11359
    Location:117 → 576
    AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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