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AMACR alpha-methylacyl-CoA racemase [ Microcaecilia unicolor ]

Gene ID: 115462923, updated on 17-Mar-2024

Summary

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Gene symbol
AMACR
Gene description
alpha-methylacyl-CoA racemase
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See AMACR in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 2 NC_044032.1 (68592390..68667760, complement)

Chromosome 2 - NC_044032.1Genomic Context describing neighboring genes Neighboring gene relaxin family peptide receptor 3 Neighboring gene solute carrier family 45 member 2 Neighboring gene C1q and TNF related 3 Neighboring gene serine/threonine-protein kinase 32A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044032.1 Chromosome 2 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-methylacyl-CoA racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-methylacyl-CoA racemase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044032.1 Reference aMicUni1.1 Primary Assembly

    Range
    68592390..68667760 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030193013.1 → XP_030048873.1  alpha-methylacyl-CoA racemase

    UniProtKB/TrEMBL
    A0A6P7X8Q8
    Conserved Domains (1) summary
    COG1804
    Location:3 → 373
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]

  2. XM_030193014.1 → XP_030048874.1  alpha-methylacyl-CoA racemase

    UniProtKB/TrEMBL
    A0A6P7X8Q8
    Conserved Domains (1) summary
    COG1804
    Location:3 → 373
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]

  3. XM_030193012.1 → XP_030048872.1  alpha-methylacyl-CoA racemase

    UniProtKB/TrEMBL
    A0A6P7X8Q8
    Conserved Domains (1) summary
    COG1804
    Location:3 → 373
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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