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ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [ Microcaecilia unicolor ]

Gene ID: 115461859, updated on 17-Mar-2024

Summary

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Gene symbol
ST8SIA5
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See ST8SIA5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 2 NC_044032.1 (45244907..45343492, complement)

Chromosome 2 - NC_044032.1Genomic Context describing neighboring genes Neighboring gene arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C Neighboring gene lipoxygenase homology PLAT domains 1 Neighboring gene protein inhibitor of activated STAT 2 Neighboring gene katanin catalytic subunit A1 like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044032.1 Chromosome 2 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044032.1 Reference aMicUni1.1 Primary Assembly

    Range
    45244907..45343492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030191919.1 → XP_030047779.1  alpha-2,8-sialyltransferase 8E isoform X3

    UniProtKB/TrEMBL
    A0A6P7XCA1
    Conserved Domains (1) summary
    pfam00777
    Location:86 → 339
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_030191918.1 → XP_030047778.1  alpha-2,8-sialyltransferase 8E isoform X2

    UniProtKB/TrEMBL
    A0A6P7X5M1
    Conserved Domains (1) summary
    pfam00777
    Location:117 → 370
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_030191917.1 → XP_030047777.1  alpha-2,8-sialyltransferase 8E isoform X1

    UniProtKB/TrEMBL
    A0A6P7WX38
    Conserved Domains (1) summary
    pfam00777
    Location:153 → 406
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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