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GAPDH glyceraldehyde-3-phosphate dehydrogenase [ Microcaecilia unicolor ]

Gene ID: 115458076, updated on 17-Mar-2024

Summary

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Gene symbol
GAPDH
Gene description
glyceraldehyde-3-phosphate dehydrogenase
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See GAPDH in Genome Data Viewer
Location:
chromosome: 14
Exon count:
14
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 14 NC_044044.1 (34776060..34811015)

Chromosome 14 - NC_044044.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U85 Neighboring gene small nucleolar RNA U85 Neighboring gene non-SMC condensin I complex subunit D2 Neighboring gene chromodomain helicase DNA binding protein 4 Neighboring gene small Cajal body-specific RNA 11 Neighboring gene NOP2 nucleolar protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044044.1 Chromosome 14 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glyceraldehyde-3-phosphate dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044044.1 Reference aMicUni1.1 Primary Assembly

    Range
    34776060..34811015
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030187888.1 → XP_030043748.1  glyceraldehyde-3-phosphate dehydrogenase

    UniProtKB/TrEMBL
    A0A6P7WTL7
    Conserved Domains (1) summary
    PLN02272
    Location:2 → 330
    PLN02272; glyceraldehyde-3-phosphate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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