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FDPS farnesyl diphosphate synthase [ Microcaecilia unicolor ]

Gene ID: 115458043, updated on 17-Mar-2024

Summary

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Gene symbol
FDPS
Gene description
farnesyl diphosphate synthase
Gene type
protein coding
RefSeq status
MODEL
Organism
Microcaecilia unicolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Gymnophiona; Siphonopidae; Microcaecilia
Orthologs
human mouse all
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Genomic context

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See FDPS in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
100 current aMicUni1.1 (GCF_901765095.1) 14 NC_044044.1 (39464565..39476553, complement)

Chromosome 14 - NC_044044.1Genomic Context describing neighboring genes Neighboring gene death associated protein 3 Neighboring gene ASH1 like histone lysine methyltransferase Neighboring gene RUN and SH3 domain containing 1 Neighboring gene pyruvate kinase L/R Neighboring gene CDC like kinase 2 Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium channel 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044044.1 Chromosome 14 Reference aMicUni1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-tissue transcriptomes of caecilian amphibians highlight incomplete knowledge of vertebrate gene families. Torres-Sánchez M, et al. DNA Res, 2019 Feb 1. PMID 30351380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dimethylallyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables geranyltranstransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in farnesyl diphosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Microcaecilia unicolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference aMicUni1.1 Primary Assembly

Genomic

  1. NC_044044.1 Reference aMicUni1.1 Primary Assembly

    Range
    39464565..39476553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030187824.1 → XP_030043684.1  LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase

    UniProtKB/TrEMBL
    A0A6P7X0L2
    Conserved Domains (1) summary
    pfam00348
    Location:9 → 237
    polyprenyl_synt; Polyprenyl synthetase
Nucleotide Protein
Heading Accession and Version

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