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LOC115455164 acyl-CoA Delta(11) desaturase [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115455164, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115455164
Gene description
acyl-CoA Delta(11) desaturase
Locus tag
O3G_MSEX000875
See related
EnsemblRapid:ENSMSXG00000018043
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
Also known as
D6
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Genomic context

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See LOC115455164 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
4
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 26 NC_051140.1 (3659648..3667698)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021950968.1 (49..1044, complement)

Chromosome 26 - NC_051140.1Genomic Context describing neighboring genes Neighboring gene 3-oxoacyl-[acyl-carrier-protein] reductase FabG Neighboring gene 3-oxoacyl-[acyl-carrier-protein] reductase FabG Neighboring gene poly [ADP-ribose] polymerase tankyrase Neighboring gene serine/threonine-protein kinase 10 Neighboring gene interleukin enhancer-binding factor 2 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-CoA Delta(11) desaturase
Names
Z11-fatty acid desaturase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051140.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    3659648..3667698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037443402.1 → XP_037299299.1  acyl-CoA Delta(11) desaturase

    UniProtKB/TrEMBL
    A0A0K2GV16
    Related
    ENSMSXP00000026124.1, ENSMSXT00000029892.1
    Conserved Domains (1) summary
    cd03505
    Location:61 → 301
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases