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LOC115448364 exostosin-1 [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115448364, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115448364
Gene description
exostosin-1
See related
EnsemblRapid:ENSMSXG00000012126
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
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Genomic context

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See LOC115448364 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) Unplaced Scaffold NW_023593946.1 (5717..14220)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942254.1 (395229..403571, complement)

NW_023593946.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: exostosin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NW_023593946.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    5717..14220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037446374.1 → XP_037302271.1  LOW QUALITY PROTEIN: exostosin-1

    UniProtKB/TrEMBL
    A0A921ZJD9
    Related
    ENSMSXP00000017392.1, ENSMSXT00000019996.1
    Conserved Domains (3) summary
    PLN02983
    Location:432 → 475
    PLN02983; biotin carboxyl carrier protein of acetyl-CoA carboxylase
    pfam03016
    Location:82 → 362
    Exostosin; Exostosin family
    pfam09258
    Location:472 → 720
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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Molecular Biology Databases