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LOC115448166 dnaJ homolog subfamily B member 6 [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115448166, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115448166
Gene description
dnaJ homolog subfamily B member 6
Locus tag
O3G_MSEX010295
See related
EnsemblRapid:ENSMSXG00000017002
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
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Genomic context

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See LOC115448166 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 17 NC_051131.1 (15412534..15424140)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942245.1 (88636..103830)

Chromosome 17 - NC_051131.1Genomic Context describing neighboring genes Neighboring gene carbonyl reductase [NADPH] 1 Neighboring gene 4-aminobutyrate aminotransferase, mitochondrial Neighboring gene uncharacterized LOC119189592 Neighboring gene dnaJ homolog subfamily B member 6-like Neighboring gene F-box only protein 21 Neighboring gene F-box only protein 21-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051131.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    15412534..15424140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030175505.2 → XP_030031365.2  LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6

    UniProtKB/TrEMBL
    A0A922CTB8
    Related
    ENSMSXP00000024465.1, ENSMSXT00000028098.1
    Conserved Domains (2) summary
    COG0484
    Location:2 → 136
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain
Nucleotide Protein
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