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MED23 mediator complex subunit 23 [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115447993, updated on 23-May-2024

Summary

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Gene symbol
MED23
Gene description
mediator complex subunit 23
Locus tag
O3G_MSEX010131
See related
EnsemblRapid:ENSMSXG00000015833
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
Orthologs
fruit fly all
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Genomic context

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See MED23 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
17
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 27 NC_051141.1 (9886960..9901521, complement)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942234.1 (351594..383589, complement)

Chromosome 27 - NC_051141.1Genomic Context describing neighboring genes Neighboring gene peroxidasin Neighboring gene failed axon connections Neighboring gene uncharacterized LOC115447987 Neighboring gene uncharacterized LOC115447973

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051141.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    9886960..9901521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030175290.2 → XP_030031150.1  mediator of RNA polymerase II transcription subunit 23

    UniProtKB/TrEMBL
    A0A921ZG74, A0A921ZGD1
    Related
    ENSMSXP00000022716.1, ENSMSXT00000026164.1
    Conserved Domains (1) summary
    pfam11573
    Location:8 → 1308
    Med23; Mediator complex subunit 23
Nucleotide Protein
Heading Accession and Version

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