U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Hs6st heparan sulfate 6-O-sulfotransferase [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115445525, updated on 22-May-2024

Summary

Go to the top of the page Help
Gene symbol
Hs6st
Gene description
heparan sulfate 6-O-sulfotransferase
Locus tag
O3G_MSEX008077
See related
EnsemblRapid:ENSMSXG00000004000
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Hs6st in Genome Data Viewer
Location:
chromosome: 28
Exon count:
8
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 28 NC_051142.1 (10665286..10764410, complement)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942140.1 (84377..179812)

Chromosome 28 - NC_051142.1Genomic Context describing neighboring genes Neighboring gene juvenile hormone esterase-like Neighboring gene para-nitrobenzyl esterase Neighboring gene ribonuclease H2 subunit B Neighboring gene YTH domain-containing family protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
heparan-sulfate 6-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051142.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    10665286..10764410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030171816.2 → XP_030027676.1  heparan-sulfate 6-O-sulfotransferase 2

    UniProtKB/TrEMBL
    A0A921Z8I3
    Related
    ENSMSXP00000005799.1, ENSMSXT00000006736.1
    Conserved Domains (1) summary
    pfam03567
    Location:115 → 380
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases