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LOC115445069 chitin synthase chs-2 [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115445069, updated on 26-Jun-2024

Summary

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Gene symbol
LOC115445069
Gene description
chitin synthase chs-2
See related
EnsemblRapid:ENSMSXG00000020859
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
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Genomic context

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See LOC115445069 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
24
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 23 NC_051137.1 (7202908..7221217)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942125.1 (706657..727402)

Chromosome 23 - NC_051137.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119190330 Neighboring gene uncharacterized LOC119190331 Neighboring gene COP9 signalosome complex subunit 8-like Neighboring gene chitin synthase chs-2 Neighboring gene COP9 signalosome complex subunit 8-like Neighboring gene uncharacterized LOC119190324

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chitin synthase genes in Manduca sexta: characterization of a gut-specific transcript and differential tissue expression of alternately spliced mRNAs during development. Hogenkamp DG, et al. Insect Biochem Mol Biol, 2005 Jun. PMID 15857759
  2. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: chitin synthase chs-2
Names
chitin synthase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051137.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    7202908..7221217
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037441747.1 → XP_037297644.1  LOW QUALITY PROTEIN: chitin synthase chs-2

    UniProtKB/TrEMBL
    Q530Z6
    Related
    ENSMSXP00000030005.1, ENSMSXT00000034442.1
    Conserved Domains (1) summary
    cd04190
    Location:556 → 878
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin
Nucleotide Protein
Heading Accession and Version

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