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LOC115444513 uncharacterized LOC115444513 [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115444513, updated on 14-Dec-2023

Summary

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Gene symbol
LOC115444513
Gene description
uncharacterized LOC115444513
Locus tag
O3G_MSEX007214
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
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Genomic context

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See LOC115444513 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
22
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 18 NC_051132.1 (12987448..13027505)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942109.1 (274214..303247)

Chromosome 18 - NC_051132.1Genomic Context describing neighboring genes Neighboring gene transposon Tf2-1 polyprotein Neighboring gene vacuolar protein sorting 53 Neighboring gene fibrohexamerin Neighboring gene CLIP-associating protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: uncharacterized protein LOC115444513

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051132.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    12987448..13027505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030170304.2 → XP_030026164.2  LOW QUALITY PROTEIN: uncharacterized protein LOC115444513

    UniProtKB/TrEMBL
    A0A921Z544
    Conserved Domains (2) summary
    cd02510
    Location:183 → 462
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:475 → 603
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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