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LOC115443035 N-acetylgalactosaminyltransferase 7 [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115443035, updated on 10-May-2024

Summary

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Gene symbol
LOC115443035
Gene description
N-acetylgalactosaminyltransferase 7
Locus tag
O3G_MSEX006017
See related
EnsemblRapid:ENSMSXG00000001929
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
Orthologs
fruit fly all
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Genomic context

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See LOC115443035 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
6
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 24 NC_051138.1 (12081432..12089062, complement)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942072.1 (859395..868553)

Chromosome 24 - NC_051138.1Genomic Context describing neighboring genes Neighboring gene spondin-2-like Neighboring gene Tubulin-binding cofactor C Neighboring gene golgin subfamily A member 6-like protein 7 Neighboring gene lysozyme

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosaminyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051138.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    12081432..12089062 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030168304.2 → XP_030024164.2  N-acetylgalactosaminyltransferase 7

    UniProtKB/TrEMBL
    A0A921Z0R9
    Related
    ENSMSXP00000002452.1, ENSMSXT00000003080.1
    Conserved Domains (2) summary
    cd02510
    Location:142 → 449
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:465 → 579
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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