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Tps1 Trehalose-6-phosphate synthase 1 [ Manduca sexta (tobacco hornworm) ]

Gene ID: 115440608, updated on 23-May-2024

Summary

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Gene symbol
Tps1
Gene description
Trehalose-6-phosphate synthase 1
Locus tag
O3G_MSEX004058
See related
EnsemblRapid:ENSMSXG00000003386
Gene type
protein coding
RefSeq status
MODEL
Organism
Manduca sexta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Bombycoidea; Sphingidae; Sphinginae; Sphingini; Manduca
Orthologs
fruit fly all
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Genomic context

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See Tps1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
12
Annotation release Status Assembly Chr Location
102 current JHU_Msex_v1.0 (GCF_014839805.1) 24 NC_051138.1 (3272327..3293017, complement)
100 previous assembly Msex_1.0 (GCF_000262585.1) Unplaced Scaffold NW_021942023.1 (654073..674798, complement)

Chromosome 24 - NC_051138.1Genomic Context describing neighboring genes Neighboring gene protein dpy-30 homolog Neighboring gene uncharacterized LOC115440606 Neighboring gene protein YIPF6 Neighboring gene glucose dehydrogenase [FAD, quinone] Neighboring gene androgen-dependent TFPI-regulating protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Integrated modeling of protein-coding genes in the Manduca sexta genome using RNA-Seq data from the biochemical model insect. Cao X, et al. Insect Biochem Mol Biol, 2015 Jul. PMID 25612938, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Names
alpha,alpha-trehalose-phosphate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manduca sexta Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference JHU_Msex_v1.0 Primary Assembly

Genomic

  1. NC_051138.1 Reference JHU_Msex_v1.0 Primary Assembly

    Range
    3272327..3293017 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030164986.2 → XP_030020846.1  alpha,alpha-trehalose-phosphate synthase [UDP-forming]

    UniProtKB/TrEMBL
    A0A921YUB9
    Related
    ENSMSXP00000004858.1, ENSMSXT00000005705.1
    Conserved Domains (1) summary
    PRK14501
    Location:20 → 765
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Nucleotide Protein
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