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EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 [ Aquila chrysaetos chrysaetos ]

Gene ID: 115353653, updated on 3-Aug-2024

Summary

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Gene symbol
EDEM1
Gene description
ER degradation enhancing alpha-mannosidase like protein 1
See related
Ensembl:ENSACCG00020009983
Gene type
protein coding
RefSeq status
MODEL
Organism
Aquila chrysaetos chrysaetos (sub-species: chrysaetos)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila
Orthologs
human mouse all
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Genomic context

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See EDEM1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
12
Annotation release Status Assembly Chr Location
101 current bAquChr1.4 (GCF_900496995.4) 20 NC_044023.1 (23182896..23197856)

Chromosome 20 - NC_044023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115333289 Neighboring gene uncharacterized LOC115333398 Neighboring gene ARF like GTPase 8B Neighboring gene glutamate metabotropic receptor 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044023.1 Chromosome 20 Reference bAquChr1.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum mannose trimming IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ER degradation-enhancing alpha-mannosidase-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aquila chrysaetos chrysaetos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAquChr1.4

Genomic

  1. NC_044023.1 Reference bAquChr1.4

    Range
    23182896..23197856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030043285.2 → XP_029899145.1  ER degradation-enhancing alpha-mannosidase-like protein 1

    UniProtKB/TrEMBL
    A0A663ERN9
    Related
    ENSACCP00020014506.1
    Conserved Domains (1) summary
    pfam01532
    Location:95 → 540
    Glyco_hydro_47; Glycosyl hydrolase family 47
Nucleotide Protein
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