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PLA2G6 phospholipase A2 group VI [ Aquila chrysaetos chrysaetos ]

Gene ID: 115352605, updated on 3-Aug-2024

Summary

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Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
See related
Ensembl:ENSACCG00020005601
Gene type
protein coding
RefSeq status
MODEL
Organism
Aquila chrysaetos chrysaetos (sub-species: chrysaetos)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila
Orthologs
human mouse all
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Genomic context

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See PLA2G6 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
16
Annotation release Status Assembly Chr Location
101 current bAquChr1.4 (GCF_900496995.4) 17 NC_044020.1 (2207356..2223992)

Chromosome 17 - NC_044020.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 184B Neighboring gene MAF bZIP transcription factor F Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene solute carrier family 16 member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044020.1 Chromosome 17 Reference bAquChr1.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aquila chrysaetos chrysaetos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAquChr1.4

Genomic

  1. NC_044020.1 Reference bAquChr1.4

    Range
    2207356..2223992
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030041040.2 → XP_029896900.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    UniProtKB/TrEMBL
    A0A663E7X4
    Related
    ENSACCP00020008233.1
    Conserved Domains (4) summary
    cd07212
    Location:480 → 793
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:285 → 405
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 247
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_030041041.2 → XP_029896901.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    UniProtKB/TrEMBL
    A0A663E7Y8
    Related
    ENSACCP00020008248.1
    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:91 → 284
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 247
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein
Heading Accession and Version

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