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P3H2 prolyl 3-hydroxylase 2 [ Aquila chrysaetos chrysaetos ]

Gene ID: 115347537, updated on 3-Aug-2024

Summary

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Gene symbol
P3H2
Gene description
prolyl 3-hydroxylase 2
See related
Ensembl:ENSACCG00020000774
Gene type
protein coding
RefSeq status
MODEL
Organism
Aquila chrysaetos chrysaetos (sub-species: chrysaetos)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila
Orthologs
human mouse all
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Genomic context

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See P3H2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
18
Annotation release Status Assembly Chr Location
101 current bAquChr1.4 (GCF_900496995.4) 10 NC_044013.1 (13562014..13639073, complement)

Chromosome 10 - NC_044013.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115347500 Neighboring gene tumor protein p63 Neighboring gene claudin 1 Neighboring gene claudin 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044013.1 Chromosome 10 Reference bAquChr1.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aquila chrysaetos chrysaetos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAquChr1.4

Genomic

  1. NC_044013.1 Reference bAquChr1.4

    Range
    13562014..13639073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030029024.2 → XP_029884884.1  prolyl 3-hydroxylase 2 isoform X1

    UniProtKB/TrEMBL
    A0A663DML3, A0A663DN15
    Conserved Domains (1) summary
    smart00702
    Location:464 → 662
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_030029025.2 → XP_029884885.1  prolyl 3-hydroxylase 2 isoform X3

    Conserved Domains (1) summary
    smart00702
    Location:311 → 509
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  3. XM_041126904.1 → XP_040982838.1  prolyl 3-hydroxylase 2 isoform X2

    Conserved Domains (1) summary
    cl21496
    Location:464 → 551
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
Nucleotide Protein
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