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TECTA tectorin alpha [ Aquila chrysaetos chrysaetos ]

Gene ID: 115344582, updated on 3-Aug-2024

Summary

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Gene symbol
TECTA
Gene description
tectorin alpha
See related
Ensembl:ENSACCG00020006351
Gene type
protein coding
RefSeq status
MODEL
Organism
Aquila chrysaetos chrysaetos (sub-species: chrysaetos)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila
Orthologs
human mouse all
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Genomic context

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See TECTA in Genome Data Viewer
Location:
chromosome: 8
Exon count:
27
Annotation release Status Assembly Chr Location
101 current bAquChr1.4 (GCF_900496995.4) 8 NC_044011.1 (42404169..42439279)

Chromosome 8 - NC_044011.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor kainate type subunit 4 Neighboring gene uncharacterized LOC115344584 Neighboring gene tubulin folding cofactor E like Neighboring gene uncharacterized LOC121233488 Neighboring gene sterol-C5-desaturase Neighboring gene sortilin related receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044011.1 Chromosome 8 Reference bAquChr1.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-tectorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aquila chrysaetos chrysaetos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAquChr1.4

Genomic

  1. NC_044011.1 Reference bAquChr1.4

    Range
    42404169..42439279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041125245.1 → XP_040981179.1  alpha-tectorin isoform X1

    UniProtKB/TrEMBL
    A0A663EAF0
    Conserved Domains (9) summary
    smart00216
    Location:713 → 865
    VWD; von Willebrand factor (vWF) type D domain
    smart00241
    Location:1803 → 2055
    ZP; Zona pellucida (ZP) domain
    smart00539
    Location:98 → 254
    NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
    smart00832
    Location:517 → 592
    C8; This domain contains 8 conserved cysteine residues
    cl17735
    Location:652 → 706
    VWC; von Willebrand factor type C domain
    pfam00094
    Location:322 → 478
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:1303 → 1371
    C8; C8 domain
    pfam14670
    Location:2087 → 2119
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cd19941
    Location:1375 → 1428
    TIL; trypsin inhibitor-like cysteine rich domain

  2. XM_041125247.1 → XP_040981181.1  alpha-tectorin isoform X3

    UniProtKB/TrEMBL
    A0A663EAF0
    Conserved Domains (4) summary
    smart00216
    Location:314 → 477
    VWD; von Willebrand factor (vWF) type D domain
    smart00539
    Location:98 → 254
    NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
    smart00832
    Location:517 → 592
    C8; This domain contains 8 conserved cysteine residues
    cl17735
    Location:652 → 706
    VWC; von Willebrand factor type C domain

  3. XM_041125246.1 → XP_040981180.1  alpha-tectorin isoform X1

    UniProtKB/TrEMBL
    A0A663EAF0
    Conserved Domains (9) summary
    smart00216
    Location:713 → 865
    VWD; von Willebrand factor (vWF) type D domain
    smart00241
    Location:1803 → 2055
    ZP; Zona pellucida (ZP) domain
    smart00539
    Location:98 → 254
    NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
    smart00832
    Location:517 → 592
    C8; This domain contains 8 conserved cysteine residues
    cl17735
    Location:652 → 706
    VWC; von Willebrand factor type C domain
    pfam00094
    Location:322 → 478
    VWD; von Willebrand factor type D domain
    pfam08742
    Location:1303 → 1371
    C8; C8 domain
    pfam14670
    Location:2087 → 2119
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cd19941
    Location:1375 → 1428
    TIL; trypsin inhibitor-like cysteine rich domain

  4. XM_030022129.1 → XP_029877989.1  alpha-tectorin isoform X2

    UniProtKB/TrEMBL
    A0A663EAF0
    Conserved Domains (8) summary
    smart00216
    Location:381 → 533
    VWD; von Willebrand factor (vWF) type D domain
    smart00241
    Location:1471 → 1723
    ZP; Zona pellucida (ZP) domain
    smart00832
    Location:185 → 260
    C8; This domain contains 8 conserved cysteine residues
    cl17735
    Location:320 → 374
    VWC; von Willebrand factor type C domain
    pfam00094
    Location:768 → 923
    VWD; von Willebrand factor type D domain
    pfam01826
    Location:1043 → 1096
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:972 → 1039
    C8; C8 domain
    pfam14670
    Location:1755 → 1787
    FXa_inhibition; Coagulation Factor Xa inhibitory site
Nucleotide Protein
Heading Accession and Version

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