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HELZ2 helicase with zinc finger 2 [ Aquila chrysaetos chrysaetos ]

Gene ID: 115339135, updated on 3-Aug-2024

Summary

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Gene symbol
HELZ2
Gene description
helicase with zinc finger 2
See related
Ensembl:ENSACCG00020000546
Gene type
protein coding
RefSeq status
MODEL
Organism
Aquila chrysaetos chrysaetos (sub-species: chrysaetos)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila
Orthologs
human mouse all
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Genomic context

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See HELZ2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
25
Annotation release Status Assembly Chr Location
101 current bAquChr1.4 (GCF_900496995.4) 3 NC_044006.1 (1548019..1576573, complement)

Chromosome 3 - NC_044006.1Genomic Context describing neighboring genes Neighboring gene prodynorphin Neighboring gene serine/threonine kinase 35 Neighboring gene fibronectin type III domain containing 11 Neighboring gene glucocorticoid modulatory element binding protein 2 Neighboring gene uncharacterized LOC115339494 Neighboring gene stathmin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044006.1 Chromosome 3 Reference bAquChr1.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA nuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
helicase with zinc finger domain 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aquila chrysaetos chrysaetos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAquChr1.4

Genomic

  1. NC_044006.1 Reference bAquChr1.4

    Range
    1548019..1576573 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041122751.1 → XP_040978685.1  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A663DLU7
    Conserved Domains (4) summary
    cd18040
    Location:2323 → 2597
    DEXXc_HELZ2-C; C-terminal DEXX-box helicase domain of HELZ2
    cd18076
    Location:756 → 984
    DEXXQc_HELZ2-N; N-terminal DEXXQ-box helicase domain of HELZ2
    pfam13087
    Location:2577 → 2783
    AAA_12; AAA domain
    cl39058
    Location:1323 → 1922
    RNB; RNB domain

  2. XM_041122754.1 → XP_040978688.1  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A663DLU7
    Conserved Domains (4) summary
    cd18040
    Location:2323 → 2597
    DEXXc_HELZ2-C; C-terminal DEXX-box helicase domain of HELZ2
    cd18076
    Location:756 → 984
    DEXXQc_HELZ2-N; N-terminal DEXXQ-box helicase domain of HELZ2
    pfam13087
    Location:2577 → 2783
    AAA_12; AAA domain
    cl39058
    Location:1323 → 1922
    RNB; RNB domain

  3. XM_030008665.2 → XP_029864525.1  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A663DLU7
    Conserved Domains (4) summary
    cd18040
    Location:2323 → 2597
    DEXXc_HELZ2-C; C-terminal DEXX-box helicase domain of HELZ2
    cd18076
    Location:756 → 984
    DEXXQc_HELZ2-N; N-terminal DEXXQ-box helicase domain of HELZ2
    pfam13087
    Location:2577 → 2783
    AAA_12; AAA domain
    cl39058
    Location:1323 → 1922
    RNB; RNB domain

  4. XM_041122753.1 → XP_040978687.1  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A663DLU7
    Conserved Domains (4) summary
    cd18040
    Location:2323 → 2597
    DEXXc_HELZ2-C; C-terminal DEXX-box helicase domain of HELZ2
    cd18076
    Location:756 → 984
    DEXXQc_HELZ2-N; N-terminal DEXXQ-box helicase domain of HELZ2
    pfam13087
    Location:2577 → 2783
    AAA_12; AAA domain
    cl39058
    Location:1323 → 1922
    RNB; RNB domain

  5. XM_030008662.1 → XP_029864522.1  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A663DLU7
    Conserved Domains (4) summary
    cd18040
    Location:2323 → 2597
    DEXXc_HELZ2-C; C-terminal DEXX-box helicase domain of HELZ2
    cd18076
    Location:756 → 984
    DEXXQc_HELZ2-N; N-terminal DEXXQ-box helicase domain of HELZ2
    pfam13087
    Location:2577 → 2783
    AAA_12; AAA domain
    cl39058
    Location:1323 → 1922
    RNB; RNB domain

  6. XM_030008664.2 → XP_029864524.1  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A663DLU7
    Related
    ENSACCP00020000847.1
    Conserved Domains (4) summary
    cd18040
    Location:2323 → 2597
    DEXXc_HELZ2-C; C-terminal DEXX-box helicase domain of HELZ2
    cd18076
    Location:756 → 984
    DEXXQc_HELZ2-N; N-terminal DEXXQ-box helicase domain of HELZ2
    pfam13087
    Location:2577 → 2783
    AAA_12; AAA domain
    cl39058
    Location:1323 → 1922
    RNB; RNB domain

  7. XM_030008663.2 → XP_029864523.1  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A663DLU7
    Conserved Domains (4) summary
    cd18040
    Location:2323 → 2597
    DEXXc_HELZ2-C; C-terminal DEXX-box helicase domain of HELZ2
    cd18076
    Location:756 → 984
    DEXXQc_HELZ2-N; N-terminal DEXXQ-box helicase domain of HELZ2
    pfam13087
    Location:2577 → 2783
    AAA_12; AAA domain
    cl39058
    Location:1323 → 1922
    RNB; RNB domain

  8. XM_041122752.1 → XP_040978686.1  helicase with zinc finger domain 2

    UniProtKB/TrEMBL
    A0A663DLU7
    Conserved Domains (4) summary
    cd18040
    Location:2323 → 2597
    DEXXc_HELZ2-C; C-terminal DEXX-box helicase domain of HELZ2
    cd18076
    Location:756 → 984
    DEXXQc_HELZ2-N; N-terminal DEXXQ-box helicase domain of HELZ2
    pfam13087
    Location:2577 → 2783
    AAA_12; AAA domain
    cl39058
    Location:1323 → 1922
    RNB; RNB domain

RNA

  1. XR_005932135.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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