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HACD4 3-hydroxyacyl-CoA dehydratase 4 [ Aquila chrysaetos chrysaetos ]

Gene ID: 115336474, updated on 3-Aug-2024

Summary

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Gene symbol
HACD4
Gene description
3-hydroxyacyl-CoA dehydratase 4
See related
Ensembl:ENSACCG00020011540
Gene type
protein coding
RefSeq status
MODEL
Organism
Aquila chrysaetos chrysaetos (sub-species: chrysaetos)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila
Orthologs
human mouse all
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Genomic context

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See HACD4 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
8
Annotation release Status Assembly Chr Location
101 current bAquChr1.4 (GCF_900496995.4) Z NC_044030.1 (49380516..49398779)

Chromosome Z - NC_044030.1Genomic Context describing neighboring genes Neighboring gene sperm-associated antigen 4 protein-like Neighboring gene interferon epsilon-like Neighboring gene uncharacterized LOC121232720 Neighboring gene focadhesin Neighboring gene uncharacterized LOC115336483

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044030.1 Chromosome Z Reference bAquChr1.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aquila chrysaetos chrysaetos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAquChr1.4

Genomic

  1. NC_044030.1 Reference bAquChr1.4

    Range
    49380516..49398779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030003497.2 → XP_029859357.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1

    UniProtKB/TrEMBL
    A0A663EXN6
    Related
    ENSACCP00020016863.1
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 198
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_030003498.2 → XP_029859358.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X4

    UniProtKB/TrEMBL
    A0A663EYU7
    Related
    ENSACCP00020016851.1
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 210
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  3. XM_041121094.1 → XP_040977028.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X2

    Conserved Domains (1) summary
    cl02156
    Location:4 → 186
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  4. XM_030003499.2 → XP_029859359.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1

    UniProtKB/TrEMBL
    A0A663EXN6
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 198
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  5. XM_030003500.2 → XP_029859360.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X4

    UniProtKB/TrEMBL
    A0A663EYU7
    Conserved Domains (1) summary
    pfam04387
    Location:50 → 210
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  6. XM_041121095.1 → XP_040977029.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X3

    Conserved Domains (1) summary
    cl02156
    Location:1 → 151
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  7. XM_041121096.1 → XP_040977030.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X3

    Conserved Domains (1) summary
    cl02156
    Location:1 → 151
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
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