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RFT1 RFT1 homolog [ Aquila chrysaetos chrysaetos ]

Gene ID: 115333337, updated on 3-Aug-2024

Summary

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Gene symbol
RFT1
Gene description
RFT1 homolog
See related
Ensembl:ENSACCG00020014320
Gene type
protein coding
RefSeq status
MODEL
Organism
Aquila chrysaetos chrysaetos (sub-species: chrysaetos)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Accipitrimorphae; Accipitriformes; Accipitridae; Accipitrinae; Aquila
Orthologs
human mouse all
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Genomic context

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See RFT1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
14
Annotation release Status Assembly Chr Location
101 current bAquChr1.4 (GCF_900496995.4) 20 NC_044023.1 (6603477..6621165)

Chromosome 20 - NC_044023.1Genomic Context describing neighboring genes Neighboring gene heat shock transcription factor, Y-linked-like Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 Neighboring gene protein kinase C delta Neighboring gene uncharacterized LOC115333266 Neighboring gene Scm like with four mbt domains 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_044023.1 Chromosome 20 Reference bAquChr1.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein RFT1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aquila chrysaetos chrysaetos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAquChr1.4

Genomic

  1. NC_044023.1 Reference bAquChr1.4

    Range
    6603477..6621165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029996186.2 → XP_029852046.1  protein RFT1 homolog isoform X1

    UniProtKB/TrEMBL
    A0A663FA95
    Related
    ENSACCP00020020791.1
    Conserved Domains (1) summary
    pfam04506
    Location:9 → 523
    Rft-1; Rft protein

  2. XM_029996187.2 → XP_029852047.1  protein RFT1 homolog isoform X2

    Conserved Domains (1) summary
    cl09326
    Location:9 → 442
    MATE_like; Multidrug and toxic compound extrusion family and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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