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EXOG exo/endonuclease G [ Suricata suricatta (meerkat) ]

Gene ID: 115292438, updated on 17-Mar-2024

Summary

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Gene symbol
EXOG
Gene description
exo/endonuclease G
See related
Ensembl:ENSSSUG00005011026
Gene type
protein coding
RefSeq status
MODEL
Organism
Suricata suricatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Herpestidae; Suricata
Orthologs
human mouse all
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Genomic context

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See EXOG in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
100 current meerkat_22Aug2017_6uvM2_HiC (GCF_006229205.1) 5 NC_043704.1 (153223387..153284598, complement)

Chromosome 5 - NC_043704.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115291360 Neighboring gene sodium voltage-gated channel alpha subunit 5 Neighboring gene uncharacterized LOC115292440 Neighboring gene uncharacterized LOC115292439 Neighboring gene activin A receptor type 2B Neighboring gene xylulokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043704.1 Chromosome 5 Reference meerkat_22Aug2017_6uvM2_HiC

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-3' exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA endodeoxyribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in apoptotic DNA fragmentation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclease EXOG, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Suricata suricatta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference meerkat_22Aug2017_6uvM2_HiC

Genomic

  1. NC_043704.1 Reference meerkat_22Aug2017_6uvM2_HiC

    Range
    153223387..153284598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029940551.1 → XP_029796411.1  nuclease EXOG, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A673U720
    Conserved Domains (2) summary
    smart00477
    Location:77 → 287
    NUC; DNA/RNA non-specific endonuclease
    pfam18026
    Location:302 → 350
    Exog_C; Endo/exonuclease (EXOG) C-terminal domain

  2. XM_029940550.1 → XP_029796410.1  nuclease EXOG, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A673U720
    Conserved Domains (2) summary
    smart00477
    Location:77 → 287
    NUC; DNA/RNA non-specific endonuclease
    pfam18026
    Location:302 → 350
    Exog_C; Endo/exonuclease (EXOG) C-terminal domain

  3. XM_029940549.1 → XP_029796409.1  nuclease EXOG, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A673U720
    Related
    ENSSSUP00005017089.1, ENSSSUT00005019486.1

  4. XM_029940553.1 → XP_029796413.1  nuclease EXOG, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A673TYX4
    Related
    ENSSSUP00005017129.1, ENSSSUT00005019529.1

  5. XM_029940554.1 → XP_029796414.1  nuclease EXOG, mitochondrial isoform X3

    Conserved Domains (1) summary
    smart00477
    Location:77 → 268
    NUC; DNA/RNA non-specific endonuclease

  6. XM_029940548.1 → XP_029796408.1  nuclease EXOG, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A673U720
    Conserved Domains (2) summary
    smart00477
    Location:77 → 287
    NUC; DNA/RNA non-specific endonuclease
    pfam18026
    Location:302 → 350
    Exog_C; Endo/exonuclease (EXOG) C-terminal domain
Nucleotide Protein
Heading Accession and Version

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