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LOC115253815 carbohydrate sulfotransferase 5 [ Aedes albopictus (Asian tiger mosquito) ]

Gene ID: 115253815, updated on 10-May-2024

Summary

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Gene symbol
LOC115253815
Gene description
carbohydrate sulfotransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Aedes albopictus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
Orthologs
fruit fly all
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Genomic context

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See LOC115253815 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_01 current AalbF5 (GCF_035046485.1) 2 NC_085137.1 (188072689..188206884)
102 previous assembly Aalbo_primary.1 (GCF_006496715.1) Unplaced Scaffold NW_021838098.1 (488016..622596)

Chromosome 2 - NC_085137.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109419092 Neighboring gene tRNA Selenocysteine associated protein Neighboring gene uncharacterized LOC134286349 Neighboring gene uncharacterized LOC134286355 Neighboring gene thioredoxin-related transmembrane protein 2 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of seminal fluid proteins in the Asian tiger mosquito, Aedes albopictus. Boes KE, et al. PLoS Negl Trop Dis, 2014 Jun. PMID 24945155, Free PMC Article
  2. A de novo transcriptome of the Asian tiger mosquito, Aedes albopictus, to identify candidate transcripts for diapause preparation. Poelchau MF, et al. BMC Genomics, 2011 Dec 20. PMID 22185595, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfur compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 5
Names
carbohydrate sulfotransferase 3
putative sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035046485.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AalbF5 Primary Assembly

Genomic

  1. NC_085137.1 Reference AalbF5 Primary Assembly

    Range
    188072689..188206884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062850859.1 → XP_062706843.1  carbohydrate sulfotransferase 5

  2. XM_062850860.1 → XP_062706844.1  carbohydrate sulfotransferase 5

  3. XM_062850861.1 → XP_062706845.1  carbohydrate sulfotransferase 5

  4. XM_062850862.1 → XP_062706846.1  carbohydrate sulfotransferase 5

Nucleotide Protein Strain
Heading Accession and Version

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