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tor1aip2 torsin 1A interacting protein 2 [ Takifugu rubripes (torafugu) ]

Gene ID: 115247341, updated on 21-Dec-2023

Summary

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Gene symbol
tor1aip2
Gene description
torsin 1A interacting protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
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Genomic context

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See tor1aip2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 20 NC_042304.1 (7953642..7955096, complement)

Chromosome 20 - NC_042304.1Genomic Context describing neighboring genes Neighboring gene abhydrolase domain containing 17A, depalmitoylase b Neighboring gene ral guanine nucleotide dissociation stimulator-like 1 Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene torsin-1A-interacting protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042304.1 Chromosome 20 Reference fTakRub1.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042304.1 Reference fTakRub1.2 Primary Assembly

    Range
    7953642..7955096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029828777.1 → XP_029684637.1  torsin-1A-interacting protein 2 isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:113 → 331
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_029828778.1 → XP_029684638.1  torsin-1A-interacting protein 2 isoform X2

Nucleotide Protein
Heading Accession and Version

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