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Pgant2 polypeptide N-acetylgalactosaminyltransferase 2 [ Formica exsecta ]

Gene ID: 115236417, updated on 10-Oct-2024

Summary

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Gene symbol
Pgant2
Gene description
polypeptide N-acetylgalactosaminyltransferase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Formica exsecta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Formica
Orthologs
fruit fly honey bee all
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Genomic context

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See Pgant2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM365146v1 (GCF_003651465.1) Unplaced Scaffold NW_021848451.1 (800437..1054547)

NW_021848451.1Genomic Context describing neighboring genes Neighboring gene UBX domain-containing protein 11-like Neighboring gene Major Facilitator Superfamily Transporter 17 Neighboring gene Cubilin Neighboring gene POU domain protein 2-like Neighboring gene KRR1 small subunit processome component homolog dbe

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_021848451 Unplaced Scaffold Reference ASM365146v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Formica exsecta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM365146v1

Genomic

  1. NW_021848451.1 Reference ASM365146v1

    Range
    800437..1054547
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029808860.1 → XP_029664720.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X1

    Conserved Domains (2) summary
    cd02510
    Location:143 → 438
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:460 → 566
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_029808868.1 → XP_029664728.1  polypeptide N-acetylgalactosaminyltransferase 2 isoform X2

    Conserved Domains (2) summary
    cd02510
    Location:142 → 437
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:459 → 565
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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