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LOC115213831 soma ferritin [ Octopus sinensis (East Asian common octopus) ]

Gene ID: 115213831, updated on 4-Jul-2024

Summary

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Gene symbol
LOC115213831
Gene description
soma ferritin
See related
EnsemblRapid:LOC115213831
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus sinensis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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See LOC115213831 in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
4
Annotation release Status Assembly LG Location
101 current ASM634580v1 (GCF_006345805.1) LG7 NC_043003.1 (86851588..86869945)

Linkage Group LG7 - NC_043003.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat-containing G-protein coupled receptor 5-like Neighboring gene nucleoporin p54 Neighboring gene putative ankyrin repeat protein RBE_0220 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_043003.1 Chromosome LG7 Reference ASM634580v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sequestering of iron ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
soma ferritin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octopus sinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM634580v1 Primary Assembly

Genomic

  1. NC_043003.1 Reference ASM634580v1 Primary Assembly

    Range
    86851588..86869945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029782730.2 → XP_029638590.1  soma ferritin

    Related
    XP_029638590.1, XM_029782730.2
    Conserved Domains (1) summary
    cd01056
    Location:10 → 166
    Euk_Ferritin; eukaryotic ferritins
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases