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LOC115208745 mitochondrial Rho GTPase 1-A-like [ Salmo trutta (river trout) ]

Gene ID: 115208745, updated on 25-Jan-2024

Summary

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Gene symbol
LOC115208745
Gene description
mitochondrial Rho GTPase 1-A-like
See related
Ensembl:ENSSTUG00000015885
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115208745 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
20
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 14 NC_042970.1 (67182542..67218356)

Chromosome 14 - NC_042970.1Genomic Context describing neighboring genes Neighboring gene arf-GAP with dual PH domain-containing protein 2-like Neighboring gene tripartite motif-containing protein 65-like Neighboring gene uncharacterized LOC115147181 Neighboring gene rhomboid-related protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042970.1 Chromosome 14 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial Rho GTPase 1-A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042970.1 Reference fSalTru1.1 Primary Assembly

    Range
    67182542..67218356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029777070.1 → XP_029632930.1  mitochondrial Rho GTPase 1-A-like isoform X1

    UniProtKB/TrEMBL
    A0A673YZ81, A0A674EKB7
    Related
    ENSSTUP00000039777.1, ENSSTUT00000041577.1
    Conserved Domains (4) summary
    cd01892
    Location:416 → 583
    Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
    cd01893
    Location:3 → 169
    Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
    pfam08355
    Location:342 → 411
    EF_assoc_1; EF hand associated
    pfam08356
    Location:219 → 306
    EF_assoc_2; EF hand associated

  2. XM_029777071.1 → XP_029632931.1  mitochondrial Rho GTPase 1-A-like isoform X2

    UniProtKB/TrEMBL
    A0A673YYG8, A0A674ELB8
    Related
    ENSSTUP00000039821.1, ENSSTUT00000041626.1
    Conserved Domains (4) summary
    cd01892
    Location:416 → 594
    Miro2; Mitochondrial Rho family 2 (Miro2), C-terminal
    cd01893
    Location:3 → 169
    Miro1; Mitochondrial Rho family 1 (Miro1), N-terminal
    pfam08355
    Location:342 → 411
    EF_assoc_1; EF hand associated
    pfam08356
    Location:219 → 306
    EF_assoc_2; EF hand associated

  3. XM_029777072.1 → XP_029632932.1  mitochondrial Rho GTPase 1-A-like isoform X3

    UniProtKB/TrEMBL
    A0A673Z0L1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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