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LOC115208577 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like [ Salmo trutta (river trout) ]

Gene ID: 115208577, updated on 21-Dec-2023

Summary

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Gene symbol
LOC115208577
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like
See related
Ensembl:ENSSTUG00000030059
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

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See LOC115208577 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 14 NC_042970.1 (62727879..62744368, complement)

Chromosome 14 - NC_042970.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115208559 Neighboring gene uncharacterized LOC115208576 Neighboring gene COMM domain-containing protein 1-like Neighboring gene uncharacterized LOC115208578

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042970.1 Chromosome 14 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042970.1 Reference fSalTru1.1 Primary Assembly

    Range
    62727879..62744368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029776737.1 → XP_029632597.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A674BB25, A0A674DDQ0

  2. XM_029776739.1 → XP_029632599.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A674BB25, A0A674DDQ0

  3. XM_029776740.1 → XP_029632600.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A674BB25, A0A674DDQ0
    Related
    ENSSTUP00000068623.1, ENSSTUT00000072812.1
    Conserved Domains (1) summary
    cl21608
    Location:159 → 348
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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