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stat2 signal transducer and activator of transcription 2 [ Salmo trutta (river trout) ]

Gene ID: 115207827, updated on 11-Apr-2024

Summary

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Gene symbol
stat2
Gene description
signal transducer and activator of transcription 2
See related
Ensembl:ENSSTUG00000016278
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
zebrafish all
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Genomic context

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See stat2 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
24
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 14 NC_042970.1 (31827192..31839011, complement)

Chromosome 14 - NC_042970.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 385A-like Neighboring gene G-protein coupled receptor 84-like Neighboring gene uncharacterized LOC115207828 Neighboring gene core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, like b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042970.1 Chromosome 14 Reference fSalTru1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway via JAK-STAT IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to peptide hormone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in type I interferon-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal transducer and activator of transcription 1-alpha/beta-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042970.1 Reference fSalTru1.1 Primary Assembly

    Range
    31827192..31839011 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029775326.1 → XP_029631186.1  signal transducer and activator of transcription 1-alpha/beta-like isoform X2

    UniProtKB/TrEMBL
    A0A673YV23
    Conserved Domains (4) summary
    cd16852
    Location:141 → 311
    STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
    cd16846
    Location:315 → 473
    STAT2_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 2 (STAT2)
    pfam02865
    Location:2 → 121
    STAT_int; STAT protein, protein interaction domain
    cl15255
    Location:554 → 699
    SH2; Src homology 2 (SH2) domain

  2. XM_029775325.1 → XP_029631185.1  signal transducer and activator of transcription 1-alpha/beta-like isoform X2

    UniProtKB/TrEMBL
    A0A673YV23
    Related
    ENSSTUP00000038601.1, ENSSTUT00000040341.1
    Conserved Domains (4) summary
    cd16852
    Location:141 → 311
    STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
    cd16846
    Location:315 → 473
    STAT2_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 2 (STAT2)
    pfam02865
    Location:2 → 121
    STAT_int; STAT protein, protein interaction domain
    cl15255
    Location:554 → 699
    SH2; Src homology 2 (SH2) domain

  3. XM_029775324.1 → XP_029631184.1  signal transducer and activator of transcription 1-alpha/beta-like isoform X1

    UniProtKB/TrEMBL
    A0A673YX60
    Related
    ENSSTUP00000038769.1, ENSSTUT00000040517.1
    Conserved Domains (4) summary
    cd16852
    Location:141 → 311
    STAT2_CCD; Coiled-coil domain of Signal Transducer and Activator of Transcription 2 (STAT2)
    cd16846
    Location:315 → 473
    STAT2_DBD; DNA-binding domain of Signal Transducer and Activator of Transcription 2 (STAT2)
    pfam02865
    Location:2 → 121
    STAT_int; STAT protein, protein interaction domain
    cl15255
    Location:554 → 699
    SH2; Src homology 2 (SH2) domain
Nucleotide Protein
Heading Accession and Version

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